PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK30541.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family ERF
Protein Properties Length: 264aa    MW: 30130.8 Da    PI: 5.0412
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK30541.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.4e-2191140356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  KFK30541.1  91 FRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAYDQAAYKLRGE 140
                 8******9.**********965...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.35E-3489149No hitNo description
SuperFamilySSF541711.57E-2390148IPR016177DNA-binding domain
PROSITE profilePS5103222.82790147IPR001471AP2/ERF domain
SMARTSM003807.2E-3990153IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-3290148IPR001471AP2/ERF domain
PRINTSPR003675.8E-1191102IPR001471AP2/ERF domain
PfamPF008471.0E-1491140IPR001471AP2/ERF domain
PRINTSPR003675.8E-11113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MAAIDMFNSN IDISDPFKEE LMKVYTNSLP PIPNTLFTFN QTTPLGLNQL TPYQINQIQN  60
QLNHKHNNNN NSSLSPKPIP MKNMTTNQKL FRGVRQRHWG KWVAEIRLPK NRTRLWLGTF  120
DTAEEAAMAY DQAAYKLRGE FARLNFPHLK NKDGSYGGDG YFFFKALHSS VEAKLEAICE  180
GMRKTEDFPP KIEYQESELG FLRSDHECSF SDESQVCYSS PESATFLDFS DSVFGDEIEI  240
GSLGLEKFPS VEIDWDAISK LSES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-2289147160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013664417.11e-135PREDICTED: ethylene-responsive transcription factor ERF060-like
RefseqXP_013666066.11e-135PREDICTED: ethylene-responsive transcription factor ERF060-like
SwissprotO656651e-127ERF60_ARATH; Ethylene-responsive transcription factor ERF060
TrEMBLA0A087GKY90.0A0A087GKY9_ARAAL; Uncharacterized protein
STRINGBra011833.1-P1e-132(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM26802768
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.17e-96ERF family protein